SubcloneSeeker: a computational framework for reconstructing tumor clone structure for cancer variant interpretation and prioritization. August 26, 2014
A unified test of linkage analysis and rare-variant association for analysis of pedigree sequence data. May 18, 2014
Phevor combines multiple biomedical ontologies for accurate identification of disease-causing alleles in single individuals and small nuclear families. April 3, 2014
MOSAIK: a hash-based algorithm for accurate next-generation sequencing short-read mapping. March 5, 2014
VAAST 2.0: improved variant classification and disease-gene identification using a conservation-controlled amino acid substitution matrix. July 8, 2013
ImagePlane: an automated image analysis pipeline for high-throughput screens using the planarian Schmidtea mediterranea. July 3, 2013
Scotty: a web tool for designing RNA-Seq experiments to measure differential gene expression. March 1, 2013
MAKER2: an annotation pipeline and genome-database management tool for second-generation genome projects December 22, 2011
