SubcloneSeeker: a computational framework for reconstructing tumor clone structure for cancer variant interpretation and prioritization. Brett / August 26, 2014
A unified test of linkage analysis and rare-variant association for analysis of pedigree sequence data. Mary Anne Karren / May 18, 2014
Phevor combines multiple biomedical ontologies for accurate identification of disease-causing alleles in single individuals and small nuclear families. Mary Anne Karren / April 3, 2014
MOSAIK: a hash-based algorithm for accurate next-generation sequencing short-read mapping. Mary Anne Karren / March 5, 2014
GEMINI: integrative exploration of genetic variation and genome annotations. Mary Anne Karren / July 18, 2013
VAAST 2.0: improved variant classification and disease-gene identification using a conservation-controlled amino acid substitution matrix. Mary Anne Karren / July 8, 2013
ImagePlane: an automated image analysis pipeline for high-throughput screens using the planarian Schmidtea mediterranea. Mary Anne Karren / July 3, 2013
Scotty: a web tool for designing RNA-Seq experiments to measure differential gene expression. Mary Anne Karren / March 1, 2013
Binary Interval Search: a scalable algorithm for counting interval intersections. Mary Anne Karren / November 4, 2012
MAKER2: an annotation pipeline and genome-database management tool for second-generation genome projects Mary Anne Karren / December 22, 2011
BamTools: a C++ API and toolkit for analyzing and managing BAM files Mary Anne Karren / April 14, 2011
Nodira Codell, MPA
nodira.codell@genetics.utah.edu
801.581.7405
Utah Center for Genetic Discovery