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Gabor Marth UCGD Principal Investigator

Gabor Marth, D.Sc.

CLICK HERE to visit the iobio website

Dr. Marth is Professor of Human Genetics at University of Utah and an internationally recognized expert in DNA sequence variation detection and analysis software development.

He has served as:

  • SAB Chair for Ontario Institute of Cancer Research Program in Computational Biology
  • Chair of Exome Sequencing Group of the 1000 Genomes Project
  • Co-Director of USTAR Center for Genetic Discovery

Dr. Marth co-developed the first probabilistic algorithm for sequence variant discovery, developed several of the most widely used file format standards for genomic data, and developed the first complete software suite for genome-scale analyses of high throughput sequence data.

The Marth research group develops algorithms and software packages for genetic variant discovery and data visualization in next-generation sequencing data; understanding tumor clonal evolution at the cellular level leading to tumorigenesis, chemo-resistance, and metastasis; as well as web-based tools for interactive, real-time, visually driven analysis of biomedical big data.

Recent Tweets

Twitter Feeds
Aaron Quinlan
Aaron Quinlan@aaronquinlanRT @TheOnion: Still Too Early To Tell If Pulling Chain Turned Overhead Fan Off bit.ly/42jifU4 pic.twitter.com/MHIiUZWn8t14 hours ago03 June 2023
Aaron Quinlan
Aaron Quinlan@aaronquinlanRT @drugmonkeyblog: This is approximately 1,300 full modular R01 years. Or a 10% cut to approximately 13,000 grants for this year.19 hours ago02 June 2023
Aaron Quinlan
Aaron Quinlan@aaronquinlanRT @Kelley__Harris: We think the mutation spectrum is evolving b/c it tends to cluster by population and species. Now in a study led by Ann…22 hours ago02 June 2023
brent pedersen
brent pedersen@brent_pnew cli tool: github.com/brentp/pbr when calling mutations, we filter on read-depth, on base-quality, and pileup-… twitter.com/i/web/status/1…1 week ago26 May 2023
brent pedersen
brent pedersen@brent_pslivar let's one write simple expressions that are applied, for example to each trio in a VCF. it also annotates ra… twitter.com/i/web/status/1…1 month ago01 May 2023
brent pedersen
brent pedersen@brent_pRT @HC_Happ: I danced my PhD for @ScienceMagazine and @aaas’s #DanceYourPhD contest! From the brilliant minds of @bandouil and @jen_z_cheng…1 month ago28 April 2023
brent pedersen
brent pedersen@brent_pRT @aaronquinlan: It's been a while, but version 2.31.0 of #bedtools is out! This includes a new "summary" command for basic stats, sanit…1 month ago28 April 2023
Alistair Ward
Alistair Ward@AlistairNWardRT @frameshift_labs: We're delighted to start work on a new STTR Phase I project with the University of Utah to improve the gene.iobio tool…9 months ago24 August 2022
Alistair Ward
Alistair Ward@AlistairNWardOur gene.iobio tool from the #iobio suite that is an important part of Frameshift Genomics' Mosaic platform has jus… twitter.com/i/web/status/1…2 years ago01 November 2021
Gabor Marth
Gabor Marth@MarthGaborThe paper describing our gene.iobio interactive variant analysis web tool is finally out: rdcu.be/czqFG.… twitter.com/i/web/status/1…2 years ago13 October 2021
Alistair Ward
Alistair Ward@AlistairNWardOur paper on our genetic variant analysis tool, gene.iobio, just came out. Take a look at the paper and the tool (… twitter.com/i/web/status/1…2 years ago13 October 2021
Alistair Ward
Alistair Ward@AlistairNWardWe've added a lot of new functionality to Mosaic. See the tutorial for more details: frameshift.io/blog/using-cha…2 years ago02 August 2021
Alistair Ward
Alistair Ward@AlistairNWardA new app from the iobio team has just been released. Take a look at the blog post and give the app a try iobio.io/2020/08/25/cli…3 years ago27 August 2020
Gabor Marth
Gabor Marth@MarthGaborThe much-awaited Mosaic genomic viz and analytics platform is out from Framshift! Great work, guys! twitter.com/ChaseAllnMille…3 years ago28 January 2020
UCGDGenetics
UCGDGenetics@USTARGeneticsGreat news! twitter.com/averyholton/st…4 years ago19 November 2019
UCGDGenetics
UCGDGenetics@USTARGeneticsRT @NPR: New DNA-sequencing technology has made it possible to rapidly diagnose some baffling rare diseases that make babies sick. And eve…4 years ago28 October 2019
UCGDGenetics
UCGDGenetics@USTARGeneticsRT @JulieCKiefer: "We as parents are not all equal. Some of us pass on more mutations than others and this is an important source of geneti…4 years ago28 October 2019
Gabor Marth
Gabor Marth@MarthGaborRT @strnr: Another useful tool from an excellent team: genepanel.iobio.io twitter.com/biorxiv_genomi…4 years ago07 August 2019
UCGDGenetics
UCGDGenetics@USTARGeneticsRT @aaronquinlan: Check out our latest from @tomsasani detailing mosaicism and marked inter-family variability in germline mutation accumul…4 years ago19 February 2019
UCGDGenetics
UCGDGenetics@USTARGeneticsRT @tomsasani: Our new work describing de novo mutation dynamics in 33 large, three-generation CEPH/Utah pedigrees is up on bioRxiv (https:…4 years ago19 February 2019
UCGDGenetics
UCGDGenetics@USTARGeneticsRT @JulieCKiefer: When the top minds in medicine and science work together, they can do incredible things. Watch One in a Million, an 8-min…4 years ago11 February 2019
Gabor Marth
Gabor Marth@MarthGaborA brand new iobio.io app just out! genepanel.iobio.io helps you create a list of candidate gene… twitter.com/i/web/status/1…4 years ago04 December 2018
Gabor Marth
Gabor Marth@MarthGaborRT @aaronquinlan: In our new manuscript, we used WGS and comprehensive variant detection to diagnose 14/14 patients w/ EIEE. We implicated…5 years ago15 August 2018
Gabor Marth
Gabor Marth@MarthGaborRT @StacyWKish: Doctors @UofUHealth applied high-tech tools developed at @USTARGenetics to identify mutations causing a rare childhood dise…5 years ago13 August 2018
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